Hello mate.
<===== that thing is a 3.5 body with a 3.9 lump (soon to be bigger I hope).
Let me see :?
Engine mounts, same
Throttle linkage, same I think
Exhaust, well the power hike from a 3.9 is partly due to the better/nigger downpipes and bore. I'd suggest sticking with the 3.5 as it routes differenlty under the gearbox )you'd need the 3.9 crossmember) and gets damaged more. I've fitted a 3.5 sports system.
Starter goes on the engine anyway
Alternator.PAS etc was on the early cars the same
Radiator is different, the 3.5 had an oil cooler as an option and it was external, the 3.9 had it as standard in the cold side of the rad.
The nuts and bolts should be easy, your worl will come translpanting the EFi, you need the whole thing but luckily the loom comes out in one piece, try to get the connector for it though and DO NOT plug in into the connector that supplied the 3.5 EFi, it needs the leads swapping round.
You might want to get the electronic speedo device for the EFi to work properly too.
Any questions jusy ask